Symposium on Synthetic and Systems Biology

›9:10 (20min)

Welcoming

9:10 - 9:30 (20min)

Welcoming

›9:30 (1h20)

Molecular programming and Systems Biology

9:30 - 10:50 (1h20)

Molecular programming and Systems Biology

› Towards the computational design of genetically encodable nanomachines - Alexis Courbet, University Of Washington, Institute for Protein Design 09:30-10:00 (30min)

› A deep unsupervised language model for protein design - Noelia Ferruz, University of Girona, University of Bayreuth 10:00-10:30 (30min)

› Artificial Metabolic Networks: enabling neural computations with metabolic networks - Leon Faure, Université Paris-Saclay 10:30-10:50 (20min)

›10:50 (30min)

Coffee break + Poster session

10:50 - 11:20 (30min)

Coffee break + Poster session

›11:20 (50min)

Molecular programming and Systems Biology

11:20 - 12:10 (50min)

Molecular programming and Systems Biology

› Design and implementation of de novo biosynthetic cascades for organic synthesis - Sabine Flitsch, The University of Manchester 11:20-11:50 (30min)

› Latent Dirichlet Allocation for Double Clustering (LDA-DC): Discovering patients phenotypes and cell populations within a single Bayesian framework - Elie-Julien El hachem, Sorbonne University, INSERM, Nutrition and Obesities: systemic approaches, NutriOmique, 91 Boulevard de l'hôpital, 75013 Paris, France 11:50-12:10 (20min)

›12:10 (1h50)

Lunch + poster

12:10 - 14:00 (1h50)

Lunch + poster

›14:00 (1h)

Molecular programming and Systems Biology

14:00 - 15:00 (1h)

Molecular programming and Systems Biology

› Towards engineering a native bacterial microcompartment system in Escherichia coli. - Denis Jallet, Toulouse Biotechnology Institute 14:00-14:20 (20min)

› Paclitaxel Causes Cardiac Failure by Inhibiting Voltage-Gated Potassium Current: Insight from an In Silico Study - Chitaranjan Mahapatra, Paris-Saclay Institute of Neuroscience 14:20-14:40 (20min)

› Protein Design with Automated Reasoning and Deep Learning - Marianne Defresne, Institut National des Sciences Appliquées 14:40-15:00 (20min)

›15:00 (30min)

Coffee break + Poster session

15:00 - 15:30 (30min)

Coffee break + Poster session

›15:30 (50min)

Natural Product discovery and Metabolic engineering

15:30 - 16:20 (50min)

Natural Product discovery and Metabolic engineering

› Scalable microbial metabolite discovery through synthetic biology - Vincent Libis, Université Paris Cité, Inserm, System Engineering and Evolution Dynamics, Paris 15:30-16:00 (30min)

› The Automated Galaxy-SynBioCAD Pipeline for Synthetic Biology Design and Engineering - Joan Herisson, Génoscope UMR 8230, University of Paris-Saclay - Evry 16:00-16:20 (20min)

›16:20 (1h40)

IRN's member meeting

16:20 - 18:00 (1h40)

IRN's member meeting